Education
- PhD, 2013, University of California, Berkeley
- BS, 2008, Genetics, University of Georgia
Research Summary
We study the interplay of gene expression and genome organization. Our work focuses on understanding how large molecular machineries involved in genome organization and gene transcription regulate each others’ function to ultimately determine cell fate and identity. We employ a broad range of approaches including single-particle cryo-electron microscopy (cryo-EM), X-ray crystallography, biochemistry, and genetics to mechanistically understand how these molecular assemblies regulate each other across molecular scales.
Awards
- New Innovator Award, National Institutes of Health Common Fund’s High-Risk, High-Reward Research Program, 2021
Recent Publications
- The USP11/TCEAL1 complex promotes transcription elongation to sustain oncogenic gene expression in neuroblastoma. Dehmer, M, Trunk, K, Gallant, P, Fleischhauer, D, Müller, M, Herold, S, Cossa, G, Conte, F, Koster, J, Sauer, F et al.. 2025. Genes Dev , .
doi: 10.1101/gad.352166.124PMID:40250979 - The structural basis for RNA slicing by human Argonaute2. Mohamed, AA, Wang, PY, Bartel, DP, Vos, SM. 2025. Cell Rep 44, 115166.
doi: 10.1016/j.celrep.2024.115166PMID:39932188 - Identification and characterization of a human MORC2 DNA binding region that is required for gene silencing. Fendler, NL, Ly, J, Welp, L, Lu, D, Schulte, F, Urlaub, H, Vos, SM. 2025. Nucleic Acids Res 53, .
doi: 10.1093/nar/gkae1273PMID:39739841 - ARF alters PAF1 complex integrity to selectively repress oncogenic transcription programs upon p53 loss. Wang, J, Fendler, NL, Shukla, A, Wu, SY, Challa, A, Lee, J, Joachimiak, LA, Minna, JD, Chiang, CM, Vos, SM et al.. 2024. Mol Cell 84, 4538-4557.e12.
doi: 10.1016/j.molcel.2024.10.020PMID:39532099 - Chemical crosslinking extends and complements UV crosslinking in analysis of RNA/DNA nucleic acid-protein interaction sites by mass spectrometry. Welp, LM, Sachsenberg, T, Wulf, A, Chernev, A, Horokhovskyi, Y, Neumann, P, Pašen, M, Siraj, A, Raabe, M, Johannsson, S et al.. 2024. bioRxiv , .
doi: 10.1101/2024.08.29.610268PMID:39257782 - Pause Patrol: Negative Elongation Factor's Role in Promoter-Proximal Pausing and Beyond. Diao, AJ, Su, BG, Vos, SM. 2025. J Mol Biol 437, 168779.
doi: 10.1016/j.jmb.2024.168779PMID:39241983 - The structural basis for RNA slicing by human Argonaute2. Mohamed, AA, Wang, PY, Bartel, DP, Vos, SM. 2024. bioRxiv , .
doi: 10.1101/2024.08.19.608718PMID:39229170 - Identification and characterization of a human MORC2 DNA binding region that is required for gene silencing. Fendler, NL, Ly, J, Welp, L, Urlaub, H, Vos, SM. 2024. bioRxiv , .
doi: 10.1101/2024.06.05.597643PMID:38895295 - Targeting MYC effector functions in pancreatic cancer by inhibiting the ATPase RUVBL1/2. Vogt, M, Dudvarski Stankovic, N, Cruz Garcia, Y, Hofstetter, J, Schneider, K, Kuybu, F, Hauck, T, Adhikari, B, Hamann, A, Rocca, Y et al.. 2024. Gut 73, 1509-1528.
doi: 10.1136/gutjnl-2023-331519PMID:38821858 - The MYCN oncoprotein is an RNA-binding accessory factor of the nuclear exosome targeting complex. Papadopoulos, D, Ha, SA, Fleischhauer, D, Uhl, L, Russell, TJ, Mikicic, I, Schneider, K, Brem, A, Valanju, OR, Cossa, G et al.. 2024. Mol Cell 84, 2070-2086.e20.
doi: 10.1016/j.molcel.2024.04.007PMID:38703770