Education
- PhD, 2003, Tel Aviv University
- MS, 1997, Tel Aviv University
Research Summary
We are interested in biological networks, gene regulation and evolution. Our work focuses on dissecting complex molecular networks to determine how they function and evolve in the face of genetic and environmental changes, as well as during differentiation, evolution and disease. The Regev lab is no longer accepting students.Awards
- Fellow of the American Association for Cancer Research Academy, 2021
- National Academy of Medicine, Member, 2020
- James Prize in Science and Technology Integration, National Academy of Sciences, 2020
- Lurie Prize in Biomedical Sciences, Foundation for the National Institutes of Health, 2020
- National Academy of Sciences, Member, 2019
- Paul Marks Prize for Cancer Research, Memorial Sloan Kettering Cancer Center, 2017
- International Society for Computational Biology (ISCB) Innovator Award, 2017
- ISCB Fellow, 2016
- Earl and Thressa Stadtman Scholar Award, 2014
- Howard Hughes Medical Institute, HHMI Investigator, 2013
- NIH Director’s Pioneer Award, 2008
- Sloan Research Fellowship, 2008
- Overton Prize, 2008
Recent Publications
- Cycling cancer persister cells arise from lineages with distinct programs. Oren, Y, Tsabar, M, Cuoco, MS, Amir-Zilberstein, L, Cabanos, HF, Hütter, JC, Hu, B, Thakore, PI, Tabaka, M, Fulco, CP et al.. 2021. Nature 596, 576-582.
doi: 10.1038/s41586-021-03796-6PMID:34381210 - Deep generative model embedding of single-cell RNA-Seq profiles on hyperspheres and hyperbolic spaces. Ding, J, Regev, A. 2021. Nat Commun 12, 2554.
doi: 10.1038/s41467-021-22851-4PMID:33953202 - COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets. Delorey, TM, Ziegler, CGK, Heimberg, G, Normand, R, Yang, Y, Segerstolpe, Å, Abbondanza, D, Fleming, SJ, Subramanian, A, Montoro, DT et al.. 2021. Nature 595, 107-113.
doi: 10.1038/s41586-021-03570-8PMID:33915569 - Compressed sensing for highly efficient imaging transcriptomics. Cleary, B, Simonton, B, Bezney, J, Murray, E, Alam, S, Sinha, A, Habibi, E, Marshall, J, Lander, ES, Chen, F et al.. 2021. Nat Biotechnol 39, 936-942.
doi: 10.1038/s41587-021-00883-xPMID:33859401 - Author Correction: Nuclei multiplexing with barcoded antibodies for single-nucleus genomics. Gaublomme, JT, Li, B, McCabe, C, Knecht, A, Yang, Y, Drokhlyansky, E, Van Wittenberghe, N, Waldman, J, Dionne, D, Nguyen, L et al.. 2020. Nat Commun 11, 5619.
doi: 10.1038/s41467-020-19357-wPMID:33139715 - The Human and Mouse Enteric Nervous System at Single-Cell Resolution. Drokhlyansky, E, Smillie, CS, Van Wittenberghe, N, Ericsson, M, Griffin, GK, Eraslan, G, Dionne, D, Cuoco, MS, Goder-Reiser, MN, Sharova, T et al.. 2020. Cell 182, 1606-1622.e23.
doi: 10.1016/j.cell.2020.08.003PMID:32888429 - Author Correction: Deciphering eukaryotic gene-regulatory logic with 100 million random promoters. de Boer, CG, Vaishnav, ED, Sadeh, R, Abeyta, EL, Friedman, N, Regev, A. 2020. Nat Biotechnol 38, 1211.
doi: 10.1038/s41587-020-0665-2PMID:32792646 - Cumulus provides cloud-based data analysis for large-scale single-cell and single-nucleus RNA-seq. Li, B, Gould, J, Yang, Y, Sarkizova, S, Tabaka, M, Ashenberg, O, Rosen, Y, Slyper, M, Kowalczyk, MS, Villani, AC et al.. 2020. Nat Methods 17, 793-798.
doi: 10.1038/s41592-020-0905-xPMID:32719530 - The network effect: studying COVID-19 pathology with the Human Cell Atlas. Teichmann, S, Regev, A. 2020. Nat Rev Mol Cell Biol 21, 415-416.
doi: 10.1038/s41580-020-0267-3PMID:32606379 - Author Correction: A single-cell and single-nucleus RNA-Seq toolbox for fresh and frozen human tumors. Slyper, M, Porter, CBM, Ashenberg, O, Waldman, J, Drokhlyansky, E, Wakiro, I, Smillie, C, Smith-Rosario, G, Wu, J, Dionne, D et al.. 2020. Nat Med 26, 1307.
doi: 10.1038/s41591-020-0976-3PMID:32587393
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